CDS
| Accession Number | TCMCG006C09027 |
| gbkey | CDS |
| Protein Id | XP_022567613.1 |
| Location | complement(join(158..232,353..504,597..840,918..977,1049..1136,1276..1406,1505..1651,1761..1811,1886..1960,2057..2164,2274..2321,2404..2565,2645..2745,2833..2980,3058..3219,3324..3441,3611..3735,3869..4108,5283..5423,5545..5700,5792..6018,6152..6173,6264..6508,6840..6953,7042..7325,7458..7539,7655..7792,7892..8009,8100..8402,8492..8687,8775..9250,9338..9444,9535..9613,9697..9852)) |
| Gene | LOC106432230 |
| GeneID | 106432230 |
| Organism | Brassica napus |
Protein
| Length | 1692aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022711892.1 |
| Definition | uncharacterized protein LOC106432230 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | tRNA rRNA methyltransferase (SpoU) family protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03016 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K15333
[VIEW IN KEGG] |
| EC |
2.1.1.34
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGGGCTCCTCTGTGATTACTTCACTGTCGCTGAGCTTCAAACAAGTTCCTCCAACAGCTGTTCCCGCTTTTCTCGACTGTGTCCTAAGCTCCACAGGCGTGTCTCCCTCCTCCCTCTTCGAATCCCTCATCAAAGAGTTGCCTTTTCACACTGAGGAGAAGAAGTTCGATTCTGATGATTGCAACCACATTGCTTCGTTGGTGGCTGGTCTTTGTCACCTACTAAAGAGTTCTGGGTTTGGTAATGAGGATAATCATAATGCGTTGCAGTTGTTTGTGTGGAGAGTGTTTATTCCACTTATGAAGATGGTTCGTGCTTATGACTTGGATGTGCTTAATAAGATAATACAATCGTTCTTTGATGTTGTGGTCGAGACTAGTGCATTGGATATATTGAGAGTGAGTTTGGTGCCTTTTCTACTGAGATCAGTTGGGGTTTCGATGGGAATGCTTCAACATGAAGAATCGGATTTCATCAGGTGGGGAGAGCTGTTGCGTGGTGGCTCTTTGGATATAAATGATAAGGATGGAAACTACGTTGGATCTTTGTCTGAGTCATTTCCGATTCCACTGTCGTGCCATCTTTTGAATCTGATTCTGAACGCTGCTTTTCAAAGTCACCAAGAAGCTCCAGAGGCTGAGGATTTTGCAGCTGGTTTGCTTTGGGATTTGTGTAATACTACTGAGAGGCTTTTGTCTCAAAGTGTGGAGCATCGTTCGTGTGCTGTTAGTTTCCTCCTCCCTGCTGTTTTCAAGGTGTTTTCAGCTCAGTCTTCTCTGAAGATTTCACTTAAAGGGAATGTGTACATACTTTCAAGGAATGGCTTCAAGAAAAGGATTTGGGAATGCTGCAAGAAGCTGTTCTCGGTTGGATCAATAGAGAGAAGGGATGCTTACAGTGTTCTCTCTTTGTGTCTTTCTTCTGATGGAGCCCTAAGTTATGTCTCAGAAAAAGACCCTGTCGATTTTGACTTTAGGTCTCAAGAGTTTTGGGAAGAAATCAAAAAAGGCTTGGTTTTTGATGAGAGCTTAGTAAGGAAGCAGTCATTGCATATACTGAAATCAGTTTTATCCATAAGCGAAGTGAGTAAGACGAGTTCTGAGAAGAAGCCGGAAGGGAACTCAGTTCATCGTGCTTTGACGAAAAAGGAGATGTGGGCAGAAAAGGAAGCCAAGTCACTTGGTGTGGGAGAATTGTATGGCTCTGTTGAATCTGCTTTGACTAGTCAGCAGCAGCAGTGGCAAGCTTTTGTGCTCTTGTATGAGATGCTTGACGAGTACGGCACTCATCTCGTAGAAGCAGTGTGGAGTAACCAGATTGATTTGTTAATCAAATCATCTTTCAGATATGAAGAAACTCCAAATGAGGAAACTGAAATATTTAATTGGTTAGAGGTTCTTTGGAATCGAGGTTTTCGTCATGATAATCCTCTAGTCAGGTGCACGGTCATGGAGTCTTTTATGGGGATTGAGTGGAGAAGATACAAAACATGTACACAATCGATGTCCCAAACTTTCGTTCTTGGGCCTTTCATAGAGGCTTTAAATGATTCTGTACACCACAAGGACTTCGGGCTGAAAAGAATCTATACCTCAAGAACAATTGAAGGTGCAGCTCAATATGTGTGTGCGTACACAAGTTGCCTCAACCCAAGGAATCGGATTGGATTTTTGATCAACTTGGCATCTCTTGCAAAGAAACAGTCTTTTGGTAGGGCTGGATTTATGGCTTTGGTACAATGCATTGTTTCTACAGCATATGTGGTTGGAGGATACGGGAACAAGGAGATGAAGCATCTTGAAAATGGATTCTCTGGGACTCCTCTAGAACCTTCTAGTGAACATTTAAGCCAAGATGAGATGTCACATATACTGGATGTCTTGAAGTTTGTTGCAGAGAGCAGCAGGCAACATTTTAATCACAAATACCGTACTCGAGTTTGCCAAAAAGTGTTGGAAACTGCTGCTTCAGTGGTGAACCCTTGTGAAGTTCCTCTTGGAACACTATTGCAGTTTGTTTCAGCAATTCCTCGGGAGTTTACTGACCATAATGGTTCATTGCGGAAAACGATGCTAGAATGGCTCCAGGGGTGCAACAGAAACACTTCCGACAGTTTATGTACTGATGGCACTCGTCTTCTAGCGAGCCTTTATGAGTATCTGAAAGAATTTGTCAGTGATCATGTTGAGGGTTTTGATGATGAAGACTTGGAAGCATGGGAATCCCAAACAAAACGATGGGCAAGAGTATTTTTCCTCACAATTAATGATGAAGAACATCTCGCCGATATCATAATGTTTGTGCAAAAAAGCGGCGTTATTTTTTTCCAAGAGAAGAACCATTTAGAACGAGCACCTGCGAAGTTTTTAATCTTTATTTTGAGTATGCTCATAGAGCTCCAGAACATGCAAGATGGAGTCTCTGAACTTAGTTCTTCGGTGAAAAGCAAGTCATGCATCGGCATTGTTGAGGAAACTGGCAAGCAGATCGTTGGTAGTGCTTCAGTTATCAATGAAAAGTTTGCTGCTGTTCTCTTATCGATACTGAAGCAGCTGGTTTCATTTGCTGATTCATCTTGCTCAATATTCTGGTCTCACACTACTGTGGAGAATGGTGTTCTGTCTGGTTCTATCATAGGAAAACTAGGGGGTCCAAGTCAACGCCGACTATCTGTTCCTACTACAACAGCTGTACTAGAAGCTGTAACATCGGTGAAAATTATTGGGTTGATCTCGTCATTCTGTGGTCAAGTCACTAGTGGTGTTACTGAACTCAAATTAGCATTGGCTTTCTTTTGGAAGTTCGTCCAGCATACGCTATCATCTCAAAATTGTAATTCTGAGGCTGAAGCTGAGATCTATCTTGCAGCATTTGAAGCGCTAGCTGCTGTACTGAATGCATTTGTGTCCTTGTGCTCAGCTAGAGCTTTCAACCTTCTAGAAAACGATAATACATTATTAGCCACGGTGGATGGTGAATATTGGTTACAAGCTTCAGTTCCGGATTTCCTCCACAACATTAACCATCTTCTCACAGCAGGACTTCTGGCAAGAAGTAGAAGGGCTGTTCTGCTTAGCTGGAAGTGGCTTTGTGTGGAGTCTCTATTATCAGTCATGAATGTTCTTGATGTCAGACGTACTCCAGGGGATAGAAGGTCTTTCTTCTCAGATGATACAGTCAAAAGCATCTTTTATGATATTGTAGAGAGCCTTGAAAATGCTGGGGAGGGTTCTGCTTTGCCTATGCTGAAATCTGTCAGACTTGCTTTGGGGATACTTGCGTCTGGGAAATCATCTTTGGATGGTTTCTCGGGTGTGGATACTCAGACGATGTGGCAGCTGGTCAAATCATGTTGGATATTGCATATCAGCTGCAAGAAGAGAAGGGTCGCACCCATTGCTGCGCTATTGTCTTCGGTGTTGCATTCTTCTTTGTTTAGTAATAAAGACATGCACGTAGCTGAAGATGGAGATGGTCCGCTGAAGTGGTTTGTTGAAAAAGTACTTGAGGAAGGTCAGAAAAGTCCACGCACAATTCGACTTGCGGCCTTGCACCTTACAGGACTGTGGCTCATGTACCCTAGGACGATAAAGTACTACATTAAAGAATTGAAGCTTCTGACTCTCTATGGCTCTGTTGCATTTGATGAGGATTTTGAAGCTGAGTTATCTGACAATAGTGATGCAAGAACTGAAGTATCGTTACTGGCAAAGAACCCAGACCCTGAACTGACAGAAGTTTTTATCAACACGGAGTTGTATGCACGTGTGTCAGTCGCTGGTCTGTTTCAGAAGCTGGCTGATTTGGCCAATATGGCCGAACCAGCATGTCAAAATCAAGATTACCAGGATGCTATTGTGGCTGGAAAGTTGTTTCTATTGGAGCTTCTTGATGCAGCGGTGCATGATAAAGACTTGGCAAAAGAGCTTTACAAGAAGTATAGTGCTATCCATAGACGAAAAATACGCGCGTGGCAGATGATATGCATTATGTCGCGCTTTGTCAGCAATGACATTGTTGGCCAAGTCATGGACAGTGTGCACATTTGCTTATATAGAAATAACCTGCCTGCTGTTCGACAATACCTGGAAACATTTGCCATAAACATTTACCTGAAGTTTCCACCATTGGTTAAAGAGCAGTTAGTTCCTATACTGCAAAATTACGACACTAAAGCTCAGCAAGCTCTCTCGTCCTATGTCTTCATTGCAGCCAATGTCATCCTTCATGCCGAAAAGATGGCTCAACAGACAAATTTGAGAGAACTTCTTCCACCAATAATTCCGTTGTTAACTTCTCATCATCACAGCTTACGAGGTTTCACTCAGTTATTAGTGCATCGGGTACTCTTTAGACTGTTTCCCCCCTTGGAGTCCACATCCTCTCAGACAATACCGTTGGAGAAACTGTCTTTTGAGAATTTGAAGTCTTACCTGGACAAGAATCCTGATTGTTCGAGATTGCGATCATCAATGGAAGGATATCTTGATGCCTATGATCCCACCACATCTGCCACTCCGGCTGGTGTTTTTGTCAATCGTGTTGAGGAGAGTGAATTTGAATGTGTTCCAACATGCCTCATGGATAACGTGATTTCTTTTCTGAATGATGTTAGGGAAGATCTTCGTGCTTCCATGGCAAAAGACATTGTTACCATTAAGAATGAAGGCTTCAAGATCGAAGAAGAGCCCAACCGTCGGTTGATGACTTCCACATCAGATGAAGAAAGGCTTTCTGAACCATCTTCGTTGGACTTCCAGAAGAAGATCACTCTGACTAAACATGAGAAGCAAGATGCTACTTCAACAACTTCTGTGCTGCAAAATGGAGAAACTTACAAGCGGCTCTTTGAAATGGAGAAAGAAGACGAGCTTGTGAGTCAGCTCTTACGATCTAGAAGCATGGAGGTGGAGAGGTTGAAATCTGGCCGACAGAGTTTGATCCTTGTGGCTTCATTGGTTGATCGTATTCCTAATCTTGCTGGATTAGCCCGGACATGCGAGATATTTAAAGCATCGGGTCTTGTCGTTGGAGATGCAAGCATAATACACGACAAACAATTTCAACTAATCAGGTAA |
| Protein: MGSSVITSLSLSFKQVPPTAVPAFLDCVLSSTGVSPSSLFESLIKELPFHTEEKKFDSDDCNHIASLVAGLCHLLKSSGFGNEDNHNALQLFVWRVFIPLMKMVRAYDLDVLNKIIQSFFDVVVETSALDILRVSLVPFLLRSVGVSMGMLQHEESDFIRWGELLRGGSLDINDKDGNYVGSLSESFPIPLSCHLLNLILNAAFQSHQEAPEAEDFAAGLLWDLCNTTERLLSQSVEHRSCAVSFLLPAVFKVFSAQSSLKISLKGNVYILSRNGFKKRIWECCKKLFSVGSIERRDAYSVLSLCLSSDGALSYVSEKDPVDFDFRSQEFWEEIKKGLVFDESLVRKQSLHILKSVLSISEVSKTSSEKKPEGNSVHRALTKKEMWAEKEAKSLGVGELYGSVESALTSQQQQWQAFVLLYEMLDEYGTHLVEAVWSNQIDLLIKSSFRYEETPNEETEIFNWLEVLWNRGFRHDNPLVRCTVMESFMGIEWRRYKTCTQSMSQTFVLGPFIEALNDSVHHKDFGLKRIYTSRTIEGAAQYVCAYTSCLNPRNRIGFLINLASLAKKQSFGRAGFMALVQCIVSTAYVVGGYGNKEMKHLENGFSGTPLEPSSEHLSQDEMSHILDVLKFVAESSRQHFNHKYRTRVCQKVLETAASVVNPCEVPLGTLLQFVSAIPREFTDHNGSLRKTMLEWLQGCNRNTSDSLCTDGTRLLASLYEYLKEFVSDHVEGFDDEDLEAWESQTKRWARVFFLTINDEEHLADIIMFVQKSGVIFFQEKNHLERAPAKFLIFILSMLIELQNMQDGVSELSSSVKSKSCIGIVEETGKQIVGSASVINEKFAAVLLSILKQLVSFADSSCSIFWSHTTVENGVLSGSIIGKLGGPSQRRLSVPTTTAVLEAVTSVKIIGLISSFCGQVTSGVTELKLALAFFWKFVQHTLSSQNCNSEAEAEIYLAAFEALAAVLNAFVSLCSARAFNLLENDNTLLATVDGEYWLQASVPDFLHNINHLLTAGLLARSRRAVLLSWKWLCVESLLSVMNVLDVRRTPGDRRSFFSDDTVKSIFYDIVESLENAGEGSALPMLKSVRLALGILASGKSSLDGFSGVDTQTMWQLVKSCWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHVAEDGDGPLKWFVEKVLEEGQKSPRTIRLAALHLTGLWLMYPRTIKYYIKELKLLTLYGSVAFDEDFEAELSDNSDARTEVSLLAKNPDPELTEVFINTELYARVSVAGLFQKLADLANMAEPACQNQDYQDAIVAGKLFLLELLDAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVSNDIVGQVMDSVHICLYRNNLPAVRQYLETFAINIYLKFPPLVKEQLVPILQNYDTKAQQALSSYVFIAANVILHAEKMAQQTNLRELLPPIIPLLTSHHHSLRGFTQLLVHRVLFRLFPPLESTSSQTIPLEKLSFENLKSYLDKNPDCSRLRSSMEGYLDAYDPTTSATPAGVFVNRVEESEFECVPTCLMDNVISFLNDVREDLRASMAKDIVTIKNEGFKIEEEPNRRLMTSTSDEERLSEPSSLDFQKKITLTKHEKQDATSTTSVLQNGETYKRLFEMEKEDELVSQLLRSRSMEVERLKSGRQSLILVASLVDRIPNLAGLARTCEIFKASGLVVGDASIIHDKQFQLIR |